PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Jcr4S03855.10
Common NameJCGZ_03155
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
Family AP2
Protein Properties Length: 414aa    MW: 45731.8 Da    PI: 6.6365
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Jcr4S03855.10genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP236.71e-1182138155
            AP2   1 sgykGVrwdkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                    s y+GV++++++gr++A+++d  s+n+ ++k+ + g ++ +e Aa  ++ a++k++g
  Jcr4S03855.10  82 SIYRGVTRHRWTGRFEAHLWDkSSWNNiQNKKGRQGAYDNEEAAAHTYDLAALKYWG 138
                    57*******************7777**99988888********************98 PP

2AP252.99.1e-17181233156
            AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                    s+y+GV +++ +grW+A+I   +   g +k+ +lg++ t eeAa+a++ a+ +++g+
  Jcr4S03855.10 181 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYNTQEEAAAAYDMAAIEYRGA 233
                    89****99**********99966...3.6*************************995 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512576127No hitNo description
PfamPF008472.5E-882138IPR001471AP2/ERF domain
CDDcd000187.29E-1782147No hitNo description
SuperFamilySSF541713.33E-1482148IPR016177DNA-binding domain
SMARTSM003806.6E-1883152IPR001471AP2/ERF domain
PROSITE profilePS5103218.21583146IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.1E-1183146IPR001471AP2/ERF domain
PRINTSPR003672.2E-68495IPR001471AP2/ERF domain
SuperFamilySSF541715.75E-18181242IPR016177DNA-binding domain
PfamPF008473.4E-12181232IPR001471AP2/ERF domain
CDDcd000182.04E-16181242No hitNo description
SMARTSM003801.1E-24182246IPR001471AP2/ERF domain
PROSITE profilePS5103218.373182240IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.1E-18182241IPR001471AP2/ERF domain
PRINTSPR003672.2E-6222242IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006110Biological Processregulation of glycolytic process
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009744Biological Processresponse to sucrose
GO:0019432Biological Processtriglyceride biosynthetic process
GO:1901959Biological Processpositive regulation of cutin biosynthetic process
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 414 aa     Download sequence    Send to blast
MKRSSASSCS SSSSSSSSPS SSSSSACSAS SSCLDSVSPP NHHQLRSEKS KSKRIRKIQT  60
KQDKCQTTAT TTSPSGGGRR SSIYRGVTRH RWTGRFEAHL WDKSSWNNIQ NKKGRQGAYD  120
NEEAAAHTYD LAALKYWGQD TTLNFPIETY SKELEEMQKM SKEEYLASLR RRSSGFSRGV  180
SKYRGVARHH HNGRWEARIG RVFGNKYLYL GTYNTQEEAA AAYDMAAIEY RGANAVTNFD  240
VSHYIDRLKK KGIPLDKILP ETLSKGSKES EEIERTSPLP LPSPPSPSIT PLHEEIVSPQ  300
LLETECPQHP PCMDTCTMIV MDPIEEHELT WSFCLDSGLV PLPVPDLPLA NGCELPDLLD  360
DTGFEDNIDL IFDACCFGND ANPADENGKE RLSSASTSPS CSTTLTSVSC NYSV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJF7036660.0JF703666.1 Jatropha curcas AP2/EREBP transcriptional factor WRI1 (WRI1) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001292947.10.0ethylene-responsive transcription factor WRI1
SwissprotQ6X5Y61e-121WRI1_ARATH; Ethylene-responsive transcription factor WRI1
TrEMBLA0A067LAB40.0A0A067LAB4_JATCU; Uncharacterized protein
STRINGPOPTR_0010s25340.11e-159(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF98593241
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54320.33e-96AP2 family protein
Publications ? help Back to Top
  1. Zhang L, et al.
    Global analysis of gene expression profiles in physic nut (Jatropha curcas L.) seedlings exposed to salt stress.
    PLoS ONE, 2014. 9(5): p. e97878
    [PMID:24837971]